Calculating Bootstrap Probabilities of Phylogeny Using Multilocus Sequence Data
نویسندگان
چکیده
منابع مشابه
Calculating bootstrap probabilities of phylogeny using multilocus sequence data.
Phylogeny estimation is extremely crucial in the study of molecular evolution. The increase in the amount of available genomic data facilitates phylogeny estimation from multilocus sequence data. Although maximum likelihood and Bayesian methods are available for phylogeny reconstruction using multilocus sequence data, these methods require heavy computation, and their application is limited to ...
متن کاملCalculating RNA motif probabilities and recognizing patterns in sequence data
of the Thesis Calculating RNA motif probabilities and recognizing patterns in sequence data
متن کاملPhylogeny of Ononis in Iran using nuclear ribosomal DNA and chloroplast sequence data
The genus Ononis,embraces more than 85 species worldwide. In the present study, materials of two subspecies of O. spinosa from different localities of Iran alongside some other native species of the genus were included in phylogenetic analyses. In addition, over 50 accessions were obtained from GenBank. In order to clarify the exact number of subspecies of O. spinosa in Iran, datasets were obta...
متن کاملBayesian species delimitation using multilocus sequence data.
In the absence of recent admixture between species, bipartitions of individuals in gene trees that are shared across loci can potentially be used to infer the presence of two or more species. This approach to species delimitation via molecular sequence data has been constrained by the fact that genealogies for individual loci are often poorly resolved and that ancestral lineage sorting, hybridi...
متن کاملInference of bacterial microevolution using multilocus sequence data.
We describe a model-based method for using multilocus sequence data to infer the clonal relationships of bacteria and the chromosomal position of homologous recombination events that disrupt a clonal pattern of inheritance. The key assumption of our model is that recombination events introduce a constant rate of substitutions to a contiguous region of sequence. The method is applicable both to ...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Molecular Biology and Evolution
سال: 2008
ISSN: 0737-4038,1537-1719
DOI: 10.1093/molbev/msn043